STRINGSTRING
BACCAP_01226 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01226" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01226Uncharacterized protein (193 aa)    
Predicted Functional Partners:
BACCAP_01225
Cobalt transport protein (204 aa)
 
          0.915
BACCAP_01224
ABC transporter, ATP-binding protein (838 aa)
 
          0.901
BACCAP_02157
Cobalt transport protein (231 aa)
 
          0.790
BACCAP_02575
Cobalt transport protein (223 aa)
 
          0.789
BACCAP_02561
Cobalt transport protein (230 aa)
 
          0.787
BACCAP_02173
Cobalt transport protein (230 aa)
 
          0.787
BACCAP_02550
Cobalt transport protein (240 aa)
 
          0.785
BACCAP_02164
Cobalt transport protein (241 aa)
 
          0.783
BACCAP_02549
ABC transporter, ATP-binding protein (458 aa)
 
          0.777
BACCAP_02576
ABC transporter, ATP-binding protein (460 aa)
 
          0.772
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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