STRINGSTRING
BACCAP_01227 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01227" - Transcriptional regulator, AraC family in Pseudoflavonifractor capillosus
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01227Transcriptional regulator, AraC family (313 aa)    
Predicted Functional Partners:
BACCAP_04786
Transcriptional regulator, AraC family (287 aa)
   
          0.716
BACCAP_01226
Uncharacterized protein (193 aa)
 
          0.707
BACCAP_01061
Transcriptional regulator, AraC family (301 aa)
   
          0.685
ahpC
Peroxiredoxin (194 aa)
              0.650
BACCAP_01228
Putative alkyl hydroperoxide reductase F subunit (540 aa)
              0.650
BACCAP_01230
Hydrolase, alpha/beta domain protein (287 aa)
              0.444
BACCAP_01231
Uncharacterized protein (270 aa)
              0.427
BACCAP_01232
Uncharacterized protein (167 aa)
              0.419
BACCAP_03405
ABC transporter, ATP-binding protein (596 aa)
 
          0.417
BACCAP_01225
Cobalt transport protein (204 aa)
              0.414
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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