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ahpC protein (Pseudoflavonifractor capillosus) - STRING interaction network
"ahpC" - Peroxiredoxin in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpCPeroxiredoxin (194 aa)    
Predicted Functional Partners:
BACCAP_01228
Putative alkyl hydroperoxide reductase F subunit (540 aa)
 
  0.999
trxA
Thioredoxin (105 aa)
   
  0.963
BACCAP_01218
Pyridine nucleotide-disulfide oxidoreductase (298 aa)
   
 
  0.957
trxB
Thioredoxin reductase (301 aa)
   
 
  0.957
BACCAP_00956
Redox-active disulfide protein 2 (90 aa)
   
  0.938
BACCAP_00840
Putative redox-active disulfide protein 2 (117 aa)
   
  0.938
BACCAP_04791
Pyridine nucleotide-disulfide oxidoreductase (288 aa)
   
 
  0.927
BACCAP_04894
Antioxidant, AhpC/TSA family (154 aa)
   
 
  0.726
BACCAP_00869
DJ-1 family protein (203 aa)
   
 
  0.673
BACCAP_02783
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (784 aa)
   
 
  0.662
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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