STRINGSTRING
BACCAP_01232 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01232" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01232Uncharacterized protein (167 aa)    
Predicted Functional Partners:
BACCAP_01231
Uncharacterized protein (270 aa)
              0.859
BACCAP_01230
Hydrolase, alpha/beta domain protein (287 aa)
              0.801
BACCAP_01234
Methyltransferase domain protein (241 aa)
              0.566
BACCAP_01235
Uncharacterized protein (171 aa)
              0.565
ahpC
Peroxiredoxin (194 aa)
              0.535
BACCAP_01228
Putative alkyl hydroperoxide reductase F subunit (540 aa)
              0.535
BACCAP_01236
Uncharacterized protein (239 aa)
              0.447
BACCAP_01227
Transcriptional regulator, AraC family (313 aa)
              0.419
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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