STRINGSTRING
BACCAP_01268 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01268" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01268Uncharacterized protein (131 aa)    
Predicted Functional Partners:
BACCAP_01267
ABC transporter, ATP-binding protein (247 aa)
     
  0.994
BACCAP_01266
Uncharacterized protein (312 aa)
              0.861
BACCAP_02747
4Fe-4S binding domain protein (600 aa)
   
   
  0.609
BACCAP_02771
Periplasmic binding protein (382 aa)
 
     
  0.536
BACCAP_01114
Cobalt ABC transporter, ATP-binding protein (284 aa)
 
     
  0.497
BACCAP_02683
Ferredoxin (73 aa)
   
   
  0.452
BACCAP_02325
4Fe-4S binding domain protein (236 aa)
   
   
  0.452
BACCAP_00579
Branched-chain amino acid ABC transporter, permease protein (305 aa)
         
  0.428
nifJ
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1180 aa)
         
  0.422
BACCAP_00576
ABC transporter, ATP-binding protein (239 aa)
         
  0.420
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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