STRINGSTRING
BACCAP_01270 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01270" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01270Uncharacterized protein (350 aa)    
Predicted Functional Partners:
BACCAP_01272
ABC transporter, ATP-binding protein (193 aa)
 
 
  0.997
BACCAP_01271
ABC transporter, permease protein (249 aa)
 
          0.979
BACCAP_01275
ABC transporter, ATP-binding protein (228 aa)
 
 
  0.936
BACCAP_01672
ABC transporter, ATP-binding protein (196 aa)
 
 
  0.934
BACCAP_03084
ABC transporter, ATP-binding protein (257 aa)
   
 
  0.923
BACCAP_01671
ABC transporter, permease protein (248 aa)
 
          0.861
BACCAP_01276
ABC transporter, permease protein (249 aa)
 
          0.824
BACCAP_03083
ABC transporter, permease protein (304 aa)
   
 
  0.789
BACCAP_01499
Molybdopterin oxidoreductase (712 aa)
   
 
  0.788
BACCAP_01269
Cyclic nucleotide-binding domain protein (224 aa)
         
  0.785
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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