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BACCAP_01272 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01272" - ABC transporter, ATP-binding protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01272ABC transporter, ATP-binding protein (193 aa)    
Predicted Functional Partners:
BACCAP_01270
Uncharacterized protein (350 aa)
 
 
  0.997
BACCAP_01271
ABC transporter, permease protein (249 aa)
          0.982
BACCAP_01670
Uncharacterized protein (360 aa)
 
 
  0.979
BACCAP_01277
Uncharacterized protein (339 aa)
 
 
  0.974
BACCAP_03085
Uncharacterized protein (368 aa)
   
 
  0.923
BACCAP_01671
ABC transporter, permease protein (248 aa)
          0.843
BACCAP_03083
ABC transporter, permease protein (304 aa)
   
 
  0.789
BACCAP_01269
Cyclic nucleotide-binding domain protein (224 aa)
              0.780
BACCAP_04275
Uncharacterized protein (928 aa)
       
  0.771
BACCAP_00921
ABC transporter, ATP-binding protein (254 aa)
 
0.729
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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