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BACCAP_01280 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01280" - ABC transporter, ATP-binding protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01280ABC transporter, ATP-binding protein (263 aa)    
Predicted Functional Partners:
BACCAP_01282
Iron chelate uptake ABC transporter, FeCT family, permease protein (275 aa)
  0.999
BACCAP_02774
Iron chelate uptake ABC transporter, FeCT family, permease protein (342 aa)
  0.996
BACCAP_00706
Iron chelate uptake ABC transporter, FeCT family, permease protein (358 aa)
 
  0.994
BACCAP_01105
Iron chelate uptake ABC transporter, FeCT family, permease protein (360 aa)
 
  0.993
BACCAP_01283
Periplasmic binding protein (382 aa)
 
 
  0.983
BACCAP_02771
Periplasmic binding protein (382 aa)
 
  0.982
BACCAP_00705
Periplasmic binding protein (373 aa)
 
 
  0.979
BACCAP_01106
Periplasmic binding protein (354 aa)
 
 
  0.913
BACCAP_04807
Periplasmic binding protein (341 aa)
   
 
  0.796
BACCAP_04804
Iron chelate uptake ABC transporter, FeCT family, permease protein (323 aa)
   
 
  0.782
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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