STRINGSTRING
BACCAP_01286 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01286" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01286Uncharacterized protein (339 aa)    
Predicted Functional Partners:
BACCAP_03288
Uncharacterized protein (178 aa)
 
            0.894
BACCAP_03289
ABC transporter, ATP-binding protein (235 aa)
 
          0.859
BACCAP_01340
ABC transporter, ATP binding protein (237 aa)
 
          0.859
BACCAP_00737
Peptidase, S41 family (439 aa)
   
          0.738
BACCAP_01172
Uncharacterized protein (585 aa)
   
          0.499
BACCAP_03265
Radical SAM domain protein (205 aa)
   
          0.467
BACCAP_01160
Putative diadenosine tetraphosphatase (214 aa)
   
          0.408
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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