STRINGSTRING
BACCAP_01303 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01303" - Serine proteinase inhibitor in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01303Serine proteinase inhibitor (486 aa)    
Predicted Functional Partners:
BACCAP_01304
Uncharacterized protein (155 aa)
              0.861
BACCAP_01027
Von Willebrand factor type A domain protein (786 aa)
   
 
    0.717
BACCAP_01302
Uncharacterized protein (42 aa)
              0.715
BACCAP_04697
Leucine Rich Repeat protein (312 aa)
         
  0.581
BACCAP_01968
Putative internalin-J (458 aa)
         
  0.581
BACCAP_01301
Oxidoreductase, short chain dehydrogenase/reductase family protein (260 aa)
 
          0.576
BACCAP_01305
Uncharacterized protein (424 aa)
              0.565
BACCAP_00097
ATPase, AAA family (512 aa)
       
    0.534
htrA
HtrA protein (447 aa)
 
        0.515
BACCAP_04102
Cobalt transport protein (278 aa)
   
          0.444
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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