STRINGSTRING
htrA protein (Pseudoflavonifractor capillosus) - STRING interaction network
"htrA" - HtrA protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htrAHtrA protein (447 aa)    
Predicted Functional Partners:
BACCAP_01307
Uncharacterized protein (34 aa)
              0.728
BACCAP_01925
Endopeptidase Clp ; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (193 aa)
 
 
  0.719
BACCAP_01966
Kinase domain protein (712 aa)
     
  0.709
BACCAP_03977
Kinase domain protein (396 aa)
     
  0.692
BACCAP_02267
Kinase domain protein (235 aa)
     
  0.692
BACCAP_01900
Tetratricopeptide repeat protein (989 aa)
   
  0.689
BACCAP_01160
Putative diadenosine tetraphosphatase (214 aa)
     
  0.684
upp
UPRTase ; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (213 aa)
   
    0.680
BACCAP_04723
ABC transporter, ATP-binding protein (579 aa)
   
 
  0.679
BACCAP_03647
ABC transporter, ATP-binding protein (578 aa)
   
 
  0.679
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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