STRINGSTRING
BACCAP_01310 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01310" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01310Uncharacterized protein (389 aa)    
Predicted Functional Partners:
BACCAP_00591
Putative esterase (432 aa)
   
          0.766
BACCAP_00550
Lipid kinase, YegS/Rv2252/BmrU family (320 aa)
   
   
    0.672
BACCAP_04415
Glyoxalase family protein (142 aa)
   
 
  0.667
BACCAP_01309
Uncharacterized protein (47 aa)
              0.665
pdxB
4-phosphoerythronate dehydrogenase (316 aa)
     
 
  0.647
BACCAP_01399
Uncharacterized protein (351 aa)
         
  0.640
BACCAP_02746
Hydrogenase, Fe-only (584 aa)
       
    0.638
nuoE
NADH-quinone oxidoreductase, E subunit (164 aa)
       
  0.638
BACCAP_02747
4Fe-4S binding domain protein (600 aa)
       
    0.636
BACCAP_03873
Uncharacterized protein (144 aa)
       
    0.632
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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