STRINGSTRING
BACCAP_01341 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01341" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01341Uncharacterized protein (539 aa)    
Predicted Functional Partners:
BACCAP_01340
ABC transporter, ATP binding protein (237 aa)
 
          0.979
BACCAP_03289
ABC transporter, ATP-binding protein (235 aa)
 
          0.859
BACCAP_01339
Uncharacterized protein (145 aa)
              0.709
BACCAP_01338
Uncharacterized protein (94 aa)
              0.709
BACCAP_02948
Sigma-70 region 2 (177 aa)
   
          0.569
BACCAP_02383
DNA-binding helix-turn-helix protein (149 aa)
   
          0.548
BACCAP_04193
Uncharacterized protein (158 aa)
   
          0.545
BACCAP_01337
Uncharacterized protein (136 aa)
              0.516
BACCAP_02195
Uncharacterized protein (329 aa)
   
          0.505
BACCAP_02536
ABC transporter, ATP-binding protein (579 aa)
   
          0.455
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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