STRINGSTRING
BACCAP_01343 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01343" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01343Uncharacterized protein (260 aa)    
Predicted Functional Partners:
BACCAP_01342
Uncharacterized protein (55 aa)
              0.651
BACCAP_03707
DNA-binding helix-turn-helix protein (220 aa)
   
          0.578
BACCAP_03706
Uncharacterized protein (232 aa)
   
          0.520
BACCAP_03901
Uncharacterized protein (436 aa)
   
          0.518
BACCAP_03902
Putative CoA-substrate-specific enzyme activase (984 aa)
   
          0.441
BACCAP_03491
Putative translation elongation factor G (895 aa)
   
          0.438
BACCAP_02452
Uncharacterized protein (286 aa)
   
          0.427
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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