STRINGSTRING
BACCAP_01351 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01351" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01351Uncharacterized protein (416 aa)    
Predicted Functional Partners:
BACCAP_04315
Uncharacterized protein (466 aa)
   
  0.987
BACCAP_02747
4Fe-4S binding domain protein (600 aa)
   
  0.861
BACCAP_01513
NAD dependent epimerase/dehydratase family protein (282 aa)
     
  0.859
sdhA
Succinate dehydrogenase flavoprotein subunit (531 aa)
 
 
  0.828
tuf
Elongation factor Tu ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (400 aa)
   
 
  0.792
BACCAP_04574
FMN-binding domain protein (780 aa)
   
 
  0.735
BACCAP_04436
Flavocytochrome c (573 aa)
   
 
  0.735
BACCAP_04271
Uncharacterized protein (601 aa)
   
 
  0.735
BACCAP_02408
FAD binding domain protein (628 aa)
   
 
  0.735
BACCAP_02329
Flavocytochrome c (672 aa)
   
 
  0.735
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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