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EDN00611.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN00611.1" - COG: COG1302 Uncharacterized protein conserved in bacteria in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00611.1COG- COG1302 Uncharacterized protein conserved in bacteria; Psort location- Cytoplasmic, score-8.96 (116 aa)    
Predicted Functional Partners:
EDN00612.1
Uncharacterized protein; KEGG- bcz-BCZK3615 8.5e-119 dhaK; possible dihydroxyacetone-related kinase K00863; COG- COG1461 Predicted kinase related to dihydroxyacetone kinase (558 aa)
 
     
  0.927
EDN00197.1
COG- COG1302 Uncharacterized protein conserved in bacteria (130 aa)
   
     
  0.668
EDN00610.1
annotation not available (34 aa)
              0.623
EDM99550.1
COG- COG4472 Uncharacterized protein conserved in bacteria; Psort location- Cytoplasmic, score-8.96 (94 aa)
   
          0.588
EDM98046.1
UPF0297 protein BACCAP_04192; COG- COG4472 Uncharacterized protein conserved in bacteria; Belongs to the UPF0297 family (84 aa)
 
          0.580
EDM99568.1
COG- COG4472 Uncharacterized protein conserved in bacteria (69 aa)
 
          0.576
EDN00092.1
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family (193 aa)
         
  0.560
EDN01246.1
EDD domain protein, DegV family; COG- COG1307 Uncharacterized protein conserved in bacteria; Psort location- Cytoplasmic, score-8.96 (124 aa)
 
          0.556
EDN00609.1
annotation not available (64 aa)
              0.509
EDN01223.1
Riboflavin transporter; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins (187 aa)
 
          0.498
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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