STRINGSTRING
BACCAP_01377 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01377" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01377Uncharacterized protein (116 aa)    
Predicted Functional Partners:
BACCAP_01378
Uncharacterized protein (558 aa)
 
     
  0.947
BACCAP_02031
Uncharacterized protein (130 aa)
 
     
  0.700
BACCAP_01376
Uncharacterized protein (34 aa)
              0.660
BACCAP_02444
EDD domain protein, DegV family (290 aa)
 
     
  0.629
BACCAP_00761
EDD domain protein, DegV family (301 aa)
 
     
  0.622
BACCAP_00814
EDD domain protein, DegV family (124 aa)
 
     
  0.621
BACCAP_01391
Uncharacterized protein (280 aa)
 
     
  0.617
BACCAP_04254
EDD domain protein, DegV family (291 aa)
 
     
  0.614
BACCAP_04192
UPF0297 protein BACCAP_04192 (84 aa)
 
     
  0.602
yqeG
HAD phosphatase, family IIIA (183 aa)
 
          0.601
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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