STRINGSTRING
BACCAP_01379 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01379" - Hemolysin in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01379Hemolysin (403 aa)    
Predicted Functional Partners:
BACCAP_03626
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase (799 aa)
       
  0.834
BACCAP_01993
Aminotransferase, class I/II (380 aa)
 
   
0.822
BACCAP_03608
Aminotransferase, class I/II (397 aa)
 
   
0.812
cysK
Cysteine synthase A (311 aa)
       
  0.798
BACCAP_03639
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase (429 aa)
       
  0.773
pepD
Xaa-His dipeptidase (490 aa)
       
    0.764
coaBC
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (401 aa)
       
    0.762
BACCAP_04197
Homoserine dehydrogenase (406 aa)
         
  0.761
thrH
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein (200 aa)
       
    0.761
ilvA
Threonine ammonia-lyase (406 aa)
         
  0.760
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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