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EDN00625.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN00625.1" - COG: COG1307 Uncharacterized protein conserved in bacteria in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00625.1COG- COG1307 Uncharacterized protein conserved in bacteria (280 aa)    
Predicted Functional Partners:
EDN00612.1
Uncharacterized protein; KEGG- bcz-BCZK3615 8.5e-119 dhaK; possible dihydroxyacetone-related kinase K00863; COG- COG1461 Predicted kinase related to dihydroxyacetone kinase (558 aa)
          0.965
EDN00626.1
Uncharacterized protein; COG- COG1846 Transcriptional regulators; Psort location- Cytoplasmic, score-8.96 (175 aa)
 
          0.830
EDN00627.1
annotation not available (51 aa)
              0.545
EDN00611.1
COG- COG1302 Uncharacterized protein conserved in bacteria; Psort location- Cytoplasmic, score-8.96 (116 aa)
 
          0.470
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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