STRINGSTRING
BACCAP_01402 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01402" - Cytosine permease in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01402Cytosine permease (431 aa)    
Predicted Functional Partners:
BACCAP_01403
Uncharacterized protein (66 aa)
              0.569
BACCAP_01401
Isochorismatase family protein (198 aa)
              0.567
BACCAP_04381
Amidohydrolase family protein (452 aa)
   
   
  0.496
BACCAP_02739
Amidohydrolase family protein (433 aa)
   
   
  0.496
BACCAP_01691
Putative guanine deaminase (432 aa)
   
   
  0.496
BACCAP_01428
Putative chlorohydrolase/aminohydrolase (446 aa)
   
   
  0.496
BACCAP_00224
HTH domain protein (359 aa)
 
     
  0.473
BACCAP_01400
Uncharacterized protein (318 aa)
              0.469
BACCAP_01399
Uncharacterized protein (351 aa)
              0.456
pyrB
Aspartate transcarbamylase (354 aa)
     
   
  0.404
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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