STRINGSTRING
BACCAP_01408 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01408" - Transporter, auxin efflux carrier in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01408Transporter, auxin efflux carrier (AEC) family protein (310 aa)    
Predicted Functional Partners:
BACCAP_01409
5’-nucleotidase, C-terminal domain protein (709 aa)
              0.516
BACCAP_01410
Uncharacterized protein (50 aa)
              0.510
BACCAP_02123
ABC transporter, permease protein (318 aa)
     
        0.497
BACCAP_02413
Malic enzyme, NAD binding domain protein (390 aa)
         
  0.449
BACCAP_01411
Uncharacterized protein (73 aa)
              0.434
BACCAP_04071
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (139 aa)
              0.404
pdxB
4-phosphoerythronate dehydrogenase (316 aa)
              0.404
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (12%) [HD]