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STRINGSTRING
EDN00647.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN00647.1" - annotation not available in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00647.1annotation not available (234 aa)    
Predicted Functional Partners:
EDN00645.1
annotation not available (73 aa)
              0.745
EDN00644.1
annotation not available (50 aa)
              0.626
EDN00643.1
5’-nucleotidase, C-terminal domain protein; KEGG- ctc-CTC01991 1.2e-82 CLV1 receptor kinase K00924; COG- COG0737 5-nucleotidase/2,3-cyclic phosphodiesterase and related esterases; Psort location- Periplasmic, score-9.76; Belongs to the 5’-nucleotidase family (709 aa)
              0.626
EDN00648.1
annotation not available (54 aa)
              0.595
EDN00649.1
KEGG- fal-FRAAL1741 2.8e-84 putative ABC transporter ATP-binding protein; COG- COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location- CytoplasmicMembrane, score-10.00 (594 aa)
              0.514
EDN00650.1
annotation not available (358 aa)
              0.490
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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