STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB77570.1Hypothetical protein; KEGG: spn:SP_1154 2.6e-50 immunoglobulin A1 protease K01390. (2591 aa)    
Predicted Functional Partners:
EFB75756.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.862
EFB74773.1
Hypothetical protein.
    
 0.862
EFB74774.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
    
 0.862
EFB74803.1
Hypothetical protein.
    
 0.862
EFB74543.1
TIGR02677 family protein.
    
 0.862
EFB74982.1
Hypothetical protein.
  
 
 0.844
EFB74767.1
KEGG: nar:Saro_2317 8.8e-15 N-acetylmuramoyl-L-alanine amidase K01446.
  
 
 0.844
EFB77569.1
Hypothetical protein.
      0.830
EFB75990.1
SH3 domain protein; KEGG: bsu:BG13806 0.00010 yrvJ; N-acetylmuramoyl-L-alanine amidase, peptidoglycan hydrolase, LytC amidase family K01448.
    
  0.807
EFB74673.1
Glycosyl hydrolase, family 18 family protein.
    
  0.804
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.