STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnfGElectron transport complex, RnfABCDGE type, G subunit. (191 aa)    
Predicted Functional Partners:
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.999
rnfC
Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
 
 
 0.999
rnfE
Electron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.998
rnfD
Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
 
 0.998
EFB76978.1
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
 
 0.996
rnfA
Electron transport complex, RnfABCDGE type, A subunit; KEGG: vfi:VF0935 2.5e-41 Na(+)-translocating NADH-quinone reductase subunit E K03617; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the NqrDE/RnfAE family.
 
 
 0.996
EFB76979.1
Na(+)-translocating NADH-quinone reductase subunit D domain protein; KEGG: eci:UTI89_C1822 2.0e-12 ydgQ; electron transport complex protein RnfE K03613; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.994
EFB76980.1
Hypothetical protein; KEGG: hch:HCH_02689 2.0e-14 nqrE; NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit K00345; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.983
EFB75400.1
4Fe-4S binding domain protein; KEGG: tte:TTE0128 8.0e-20 nuoI; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) K00338.
   
 
 0.951
nifJ
Pyruvate synthase; KEGG: ctc:CTC01741 3.5e-296 pyruvate-flavodoxin oxidoreductase K03737.
     
 0.705
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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