STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyoEProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (297 aa)    
Predicted Functional Partners:
coxC
Cytochrome c oxidase subunit III.
 
 
 0.998
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.996
coxA
Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 0.996
COSY_0032
Cytochrome c oxidase assembly protein.
 
 0.994
COSY_0036
Cytochrome c oxidase assembly protein.
 
 0.989
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.928
ccoN
Cbb3-type cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
    
 0.906
ccoP
Cbb3-type cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.904
ccoO
Cbb3-type cytochrome c oxidase subunit II.
     
 0.903
COSY_0029
Conserved hypothetical protein.
 
  
 0.860
Your Current Organism:
Vesicomyosocius okutanii
NCBI taxonomy Id: 412965
Other names: C. Vesicomyosocius okutanii HA, Calyptogena okutanii thioautotrophic gill symbiont HA, Candidatus Vesicomyosocius okutanii HA, Candidatus Vesicomyosocius okutanii str. HA, Candidatus Vesicomyosocius okutanii strain HA
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