STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmag_0744PFAM: electron transport protein SCO1/SenC; KEGG: rbe:RBE_0699 Sco2 protein precursor. (224 aa)    
Predicted Functional Partners:
Rmag_0745
PFAM: protein of unknown function DUF461; KEGG: dar:Daro_1578 protein of unknown function DUF461.
 
   
 0.928
Rmag_0323
PFAM: Redoxin domain protein; KEGG: tbd:Tbd_2118 thioredoxin.
 
   0.899
Rmag_0034
Cytochrome-c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.854
Rmag_0036
PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: mca:MCA0882 cytochrome c oxidase assembly protein, putative.
 
 
 0.668
Rmag_0032
PFAM: cytochrome oxidase assembly; KEGG: noc:Noc_3040 cytochrome oxidase assembly.
 
 
 0.640
Rmag_0011
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.594
Rmag_0682
KEGG: tcx:Tcr_1759 thioredoxin, putative.
   
   0.593
Rmag_0009
KEGG: lpf:lpl2631 ubiquinol-cytochrome c reductase cytochrome c1 subunit.
  
   
 0.531
Rmag_0203
PFAM: cytochrome c, class I; KEGG: ppr:PBPRA3501 putative cytochrome c4.
 
     0.520
Rmag_0038
KEGG: mca:MCA0131 hypothetical protein.
 
  
 0.482
Your Current Organism:
Ruthia magnifica
NCBI taxonomy Id: 413404
Other names: C. Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica strain Cm (Calyptogena magnifica), Ruthia magnifica str. Cm (Calyptogena magnifica)
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