STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpmIPhosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (532 aa)    
Predicted Functional Partners:
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 0.990
pgk
PFAM: phosphoglycerate kinase; KEGG: mar:MAE_43670 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.984
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 0.969
ACK67206.1
PFAM: beta-lactamase domain protein; KEGG: mar:MAE_60380 beta-lactamase-like protein.
   
 0.945
ACK64160.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: syn:slr2123 D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.905
ACK66388.1
TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mar:MAE_50690 D-3-phosphoglycerate dehydrogenase.
     
 0.905
ACK64439.1
PFAM: RNP-1 like RNA-binding protein; KEGG: syf:Synpcc7942_0679 RNA-binding region RNP-1.
   
 0.900
ACK65125.1
PFAM: RNP-1 like RNA-binding protein; KEGG: syf:Synpcc7942_0679 RNA-binding region RNP-1.
   
 0.900
ACK65579.1
PFAM: RNP-1 like RNA-binding protein; KEGG: amr:AM1_A0051 RNA-binding protein.
   
 0.900
ACK65978.1
KEGG: ter:Tery_3799 glycerate kinase.
     
  0.900
Your Current Organism:
Rippkaea orientalis
NCBI taxonomy Id: 41431
Other names: Cyanothece sp. PCC 8801, R. orientalis PCC 8801, Rippkaea orientalis PCC 8801, Synechococcus sp. PCC 8801, Synechococcus sp. RF-1
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