STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK66297.1PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: syn:sll1033 probable protein phosphatase. (669 aa)    
Predicted Functional Partners:
ACK67476.1
KEGG: syn:slr0157 hypothetical protein.
   
 0.995
ACK68200.1
PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mar:MAE_28960 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
    
 0.982
ACK64823.1
Putative signal transduction protein with EFhand domain; PFAM: Calcium-binding EF-hand-containing protein; KEGG: ter:Tery_2045 signal transduction protein.
    
 0.969
ACK64885.1
KEGG: npu:Npun_F5058 hypothetical protein.
  
 0.966
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
 
 0.943
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 
 0.941
ACK64549.1
KEGG: mar:MAE_13090 peptidyl-prolyl cis-trans isomerase.
    
 
 0.940
ACK64632.1
Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.940
ACK67278.1
Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.940
ACK67938.1
KEGG: ava:Ava_1493 small GTP-binding protein domain-containing protein; TIGRFAM: small GTP-binding protein; PFAM: leucine-rich repeat protein; Miro domain protein; Ras family protein; SMART: Ras small GTPase, Ras type; Ras small GTPase, Rab type; leucine-rich repeat-containing protein typical subtype.
  
 0.912
Your Current Organism:
Rippkaea orientalis
NCBI taxonomy Id: 41431
Other names: Cyanothece sp. PCC 8801, R. orientalis PCC 8801, Rippkaea orientalis PCC 8801, Synechococcus sp. PCC 8801, Synechococcus sp. RF-1
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.