STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK68090.1PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cja:CJA_0006 alpha-amylase, putative, amy13G. (878 aa)    
Predicted Functional Partners:
ACK66645.1
KEGG: rpa:RPA1017 nitrogen fixation-related protein.
  
     0.550
ACK66371.1
KEGG: mca:MCA0044 hypothetical protein.
  
     0.525
ACK68054.1
Putative Zn-dependent protease; KEGG: amr:AM1_5159 conserved hypothetical protein, possible Zn-dependent protease.
  
     0.509
ACK68160.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: syn:slr1202 putative ABC-type lactose transport system permease protein.
 
  
 0.491
ACK67685.1
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: syn:sll1499 ferredoxin-dependent glutamate synthase.
     
 0.483
ACK64416.1
KEGG: mar:MAE_57810 hypothetical protein.
 
   
 0.470
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.464
ACK66621.1
KEGG: mar:MAE_17420 hypothetical protein.
  
     0.454
ACK67785.1
KEGG: nmu:Nmul_A2461 hypothetical protein.
  
     0.436
ACK66299.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: syn:slr1224 putative ABC-type lactose transport system ATP-binding protein.
 
  
 0.424
Your Current Organism:
Rippkaea orientalis
NCBI taxonomy Id: 41431
Other names: Cyanothece sp. PCC 8801, R. orientalis PCC 8801, Rippkaea orientalis PCC 8801, Synechococcus sp. PCC 8801, Synechococcus sp. RF-1
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