STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111222415MCL1 apoptosis regulator, BCL2 family member b. (315 aa)    
Predicted Functional Partners:
Bcl2l11
Uncharacterized protein.
    
 0.999
bax
BCL2 associated X, apoptosis regulator a.
    
 
 0.948
LOC111221747
Zgc:153993.
    
 
 0.938
huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
 
 0.903
LOC111232006
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
     
 0.901
LOC111232207
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
     
 0.901
LOC111232191
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
     
 0.901
LOC111239168
Peptidase S1 domain-containing protein.
     
 0.901
LOC111218882
Granzyme 3, tandem duplicate 4; Belongs to the peptidase S1 family.
     
 0.900
becn1
Beclin 1, autophagy related.
    
 
 0.793
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.