STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111221929Prepronociceptin a. (227 aa)    
Predicted Functional Partners:
LOC111235020
Opiate receptor-like 1; Belongs to the G-protein coupled receptor 1 family.
   
 0.992
pdyn
Prodynorphin.
   
 
 0.810
gal
Galanin/GMAP prepropeptide.
     
 0.750
penk
Proenkephalin a.
     
 0.732
LOC111235103
Neuropeptides B/W receptor 2a; Belongs to the G-protein coupled receptor 1 family.
    
 0.700
LOC111216952
Somatostatin.
   
 
 0.696
LOC111237839
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
 0.676
LOC111231053
Opioid receptor, kappa 1; Belongs to the G-protein coupled receptor 1 family.
   
 0.676
LOC111240052
Proopiomelanocortin.
     
 0.672
LOC111230638
Uncharacterized protein.
     
 0.672
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.