STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111216618DnaJ heat shock protein family (Hsp40) member A3b. (492 aa)    
Predicted Functional Partners:
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
 
 0.921
LOC111240258
Uncharacterized protein.
  
 0.863
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.792
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
 
 0.785
hspd1
Heat shock 60 protein 1; Belongs to the chaperonin (HSP60) family.
  
 0.754
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.728
ENSSDUP00000011941
Si:ch211-199o1.2.
 
 0.728
LOC111238863
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.720
LOC111234021
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
 
 0.715
ENSSDUP00000004345
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.714
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (28%) [HD]