STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000029976Uncharacterized protein. (147 aa)    
Predicted Functional Partners:
LOC111227529
Regulator of G protein signaling 16.
   
 0.701
LOC111228910
Regulator of G protein signaling 5b.
  
 0.698
LOC111228780
Uncharacterized protein.
   
 0.693
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
   
 0.692
LOC111223411
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.692
LOC111234326
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
   
 0.692
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
   
 0.692
LOC111222841
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 0.692
LOC111218687
Uncharacterized protein.
   
 0.690
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
 0.689
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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