STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC1_1463enoyl-CoA hydratase. (266 aa)    
Predicted Functional Partners:
hbd
[Synonyms] Beta-hydroxybutyryl-CoA dehydrogenase.
 0.963
RC1_0378
acyl-CoA dehydrogenase.
 
  0.958
gcdH
glutaryl-CoA dehydrogenase; Identified by match to protein family HMM PF00106 match to protein family HMM PF01370.
  
  0.950
ivd2
isovaleryl-CoA dehydrogenase; Identified by match to protein family HMM PF00108 match to protein family HMM PF02803 match to protein family HMM TIGR01930.
  
  0.950
RC1_1018
acyl-CoA dehydrogenase, putative.
  
  0.950
RC1_3580
MaoC-like dehydratase, putative; Identified by match to protein family HMM PF01569.
  
 0.934
fadJ
Fatty acid oxidation complex alpha subunit; [includes] Enoyl-CoA hydratase 3-hydroxyacyl-CoA dehydrogenase 3-hydroxybutyryl-CoA epimerase identified by match to protein family HMM PF04542 match to protein family HMM PF04545 match to protein family HMM TIGR02392 match to protein family HMM TIGR02937.
0.932
RC1_1464
Sensor histidine kinase; Contains PF02518.
   
   0.929
RC1_0547
Peroxisomal bifunctional enzyme; [synonyms] PBE PBFE [Includes] Enoyl-CoA hydratase 3,2-trans-enoyl-CoA isomerase 3-hydroxyacyl-CoA dehydrogenase identified by match to protein family HMM PF00015 match to protein family HMM PF00672; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.928
mccA
[synonyms] 3-methylcrotonyl-CoA carboxylase biotin-containing subunit identified by match to protein family HMM PF00682.
  
 0.927
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.