STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bchLLight-independent protochlorophyllide reductase,iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. (303 aa)    
Predicted Functional Partners:
bchB
Light-independent protochlorophyllide reductase,B subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
 0.999
bchN
Light-independent protochlorophyllide reductase,N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
 0.999
bchZ
Chlorophyllide reductase subunit Z.
  
 
 0.997
bchF
2-vinyl bacteriochlorophyllide hydratase, putative; Identified by match to protein family HMM PF00148 match to protein family HMM PF06710 match to protein family HMM TIGR02014.
 
 
 0.996
bchM
[synonyms] Magnesium-protoporphyrin IX methyltransferase identified by match to protein family HMM PF00348.
 
  
 0.995
bchH
Mg-protoporphyrin IX chelatase subunit H identified by match to protein family HMM TIGR01202.
 
  
 0.987
bchG
Geranylgeranyl bacteriochlorophyll synthase; [Synonyms] Bacteriochlorophyll synt Hase 33 kDa chain identified by match to protein family HMM PF00005.
 
 
 0.983
nifD
Nitrogenase molybdenum-iron protein alpha chain; (Nitrogenase component I) identified by match to protein family HMM PF04024.
 
 
 0.983
bchY
Chlorophyllide reductase subunit Y.
  
 
 0.979
pufL
Photosynthetic reaction center L subunit; Identified by match to protein family HMM PF03209 match to protein family HMM PF07690; Belongs to the reaction center PufL/M/PsbA/D family.
  
  
 0.977
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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