node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RC1_2700 | RC1_3013 | RC1_2700 | RC1_3013 | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | Peptidase M23; Part of the cytochrome c-type biogenesis protein cluster identified by match to protein family HMM PF05175. | 0.672 |
RC1_2700 | dacA | RC1_2700 | RC1_1167 | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | D-alanyl-D-alanine carboxypeptidase; Also called penicillin-binding protein 5.Gene symbol synonym PFv; Belongs to the peptidase S11 family. | 0.919 |
RC1_2700 | ftsI | RC1_2700 | RC1_0619 | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | Peptidoglycan synthetase FtsI; Gene symbol synonym pbpB.Also called penicillin-binding protein 3; identified by match to protein family HMM PF01225 match to protein family HMM PF02875 match to protein family HMM TIGR01082. | 0.942 |
RC1_2700 | ftsW | RC1_2700 | RC1_0614 | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | Cell division protein FtsW, putative; Identified by match to protein family HMM PF02491 match to protein family HMM TIGR01174; Belongs to the SEDS family. | 0.818 |
RC1_2700 | mltG | RC1_2700 | RC1_1568 | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.745 |
RC1_2700 | mrcA | RC1_2700 | RC1_1608 | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | Penicillin-binding protein 1A (PBP-1a) (PBP1a) MrcA, putative; TIGR02074 PF00905: Penicillin binding protein transpeptidase domain; Penicillin-insensitive transglycosylase (EC 2.4.2.-)(Peptidoglycan TGase) Penicillin-sensitive transpeptidase(EC 3.4.-.-)(DD-transpeptidase); identified by match to protein family HMM PF00070 match to protein family HMM PF02852 match to protein family HMM PF07992 match to protein family HMM TIGR01424. | 0.952 |
RC1_2700 | mrdA | RC1_2700 | RC1_1965 | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | Penicillin-binding protein 2; Gene symbol synonym pbpA.Part of the rodA operon. | 0.782 |
RC1_2700 | murG | RC1_2700 | RC1_0613 | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.686 |
RC1_2700 | rodA | RC1_2700 | RC1_1964 | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | Rod shape-determining protein RodA (FtsW, Bacterial cell division membrane protein); Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.683 |
RC1_2700 | tonB-4 | RC1_2700 | RC1_1026 | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | Protein TonB, putative; Identified by match to protein family HMM PF00278 match to protein family HMM PF02784. | 0.842 |
RC1_3013 | RC1_2700 | RC1_3013 | RC1_2700 | Peptidase M23; Part of the cytochrome c-type biogenesis protein cluster identified by match to protein family HMM PF05175. | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | 0.672 |
RC1_3013 | mltG | RC1_3013 | RC1_1568 | Peptidase M23; Part of the cytochrome c-type biogenesis protein cluster identified by match to protein family HMM PF05175. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.491 |
RC1_3013 | mrcA | RC1_3013 | RC1_1608 | Peptidase M23; Part of the cytochrome c-type biogenesis protein cluster identified by match to protein family HMM PF05175. | Penicillin-binding protein 1A (PBP-1a) (PBP1a) MrcA, putative; TIGR02074 PF00905: Penicillin binding protein transpeptidase domain; Penicillin-insensitive transglycosylase (EC 2.4.2.-)(Peptidoglycan TGase) Penicillin-sensitive transpeptidase(EC 3.4.-.-)(DD-transpeptidase); identified by match to protein family HMM PF00070 match to protein family HMM PF02852 match to protein family HMM PF07992 match to protein family HMM TIGR01424. | 0.643 |
dacA | RC1_2700 | RC1_1167 | RC1_2700 | D-alanyl-D-alanine carboxypeptidase; Also called penicillin-binding protein 5.Gene symbol synonym PFv; Belongs to the peptidase S11 family. | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | 0.919 |
dacA | ftsI | RC1_1167 | RC1_0619 | D-alanyl-D-alanine carboxypeptidase; Also called penicillin-binding protein 5.Gene symbol synonym PFv; Belongs to the peptidase S11 family. | Peptidoglycan synthetase FtsI; Gene symbol synonym pbpB.Also called penicillin-binding protein 3; identified by match to protein family HMM PF01225 match to protein family HMM PF02875 match to protein family HMM TIGR01082. | 0.484 |
dacA | mrcA | RC1_1167 | RC1_1608 | D-alanyl-D-alanine carboxypeptidase; Also called penicillin-binding protein 5.Gene symbol synonym PFv; Belongs to the peptidase S11 family. | Penicillin-binding protein 1A (PBP-1a) (PBP1a) MrcA, putative; TIGR02074 PF00905: Penicillin binding protein transpeptidase domain; Penicillin-insensitive transglycosylase (EC 2.4.2.-)(Peptidoglycan TGase) Penicillin-sensitive transpeptidase(EC 3.4.-.-)(DD-transpeptidase); identified by match to protein family HMM PF00070 match to protein family HMM PF02852 match to protein family HMM PF07992 match to protein family HMM TIGR01424. | 0.918 |
dacA | mrdA | RC1_1167 | RC1_1965 | D-alanyl-D-alanine carboxypeptidase; Also called penicillin-binding protein 5.Gene symbol synonym PFv; Belongs to the peptidase S11 family. | Penicillin-binding protein 2; Gene symbol synonym pbpA.Part of the rodA operon. | 0.476 |
dacA | rodA | RC1_1167 | RC1_1964 | D-alanyl-D-alanine carboxypeptidase; Also called penicillin-binding protein 5.Gene symbol synonym PFv; Belongs to the peptidase S11 family. | Rod shape-determining protein RodA (FtsW, Bacterial cell division membrane protein); Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.403 |
ftsI | RC1_2700 | RC1_0619 | RC1_2700 | Peptidoglycan synthetase FtsI; Gene symbol synonym pbpB.Also called penicillin-binding protein 3; identified by match to protein family HMM PF01225 match to protein family HMM PF02875 match to protein family HMM TIGR01082. | Penicillin-binding protein, 1A family; TIGR02074 With a good score above the trusted cutoff and uncharacterized homologs; PF00905: Penicillin binding protein transpeptidase domain. | 0.942 |
ftsI | dacA | RC1_0619 | RC1_1167 | Peptidoglycan synthetase FtsI; Gene symbol synonym pbpB.Also called penicillin-binding protein 3; identified by match to protein family HMM PF01225 match to protein family HMM PF02875 match to protein family HMM TIGR01082. | D-alanyl-D-alanine carboxypeptidase; Also called penicillin-binding protein 5.Gene symbol synonym PFv; Belongs to the peptidase S11 family. | 0.484 |