STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (412 aa)    
Predicted Functional Partners:
kynA
Tryptophan 2,3-dioxygenase, putative; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
 
 
 0.997
kynB
Cyclase, putative; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.
 
 
 0.993
kat
Catalase; Identified by match to protein family HMM PF00444 match to protein family HMM TIGR01022.
   
 
  0.902
katA
Catalase; Gene symbol synonym catA; identified by match to protein family HMM PF00430.
   
 
  0.902
hmgA
Homogentisate 1,2-dioxygenase.
  
  
 0.543
hppD
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.510
acyII-2
Penicillin acylase II, putative; Also called penicillin amidase.
       0.463
hutH
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
   
  
 0.452
RC1_1183
Ubiquinone biosynthesis hydroxylase, UbiH; Identified by match to protein family HMM PF01026 match to protein family HMM TIGR00010.
  
  
 0.436
ubiH
2-polyprenyl-6-methoxyphenol 4-hydroxylase, putative.
  
  
 0.436
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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