Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Hbut_0224 | Hbut_0399 | Hbut_0224 | Hbut_0399 | Decarboxylase. | L asparaginase. | 0.847 |
Hbut_0224 | Hbut_1044 | Hbut_0224 | Hbut_1044 | Decarboxylase. | Aspartate aminotransferase. | 0.948 |
Hbut_0224 | argG | Hbut_0224 | Hbut_0305 | Decarboxylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.825 |
Hbut_0224 | pyrB | Hbut_0224 | Hbut_0110 | Decarboxylase. | Aspartate carbamoyltransferase. | 0.802 |
Hbut_0224 | pyrI | Hbut_0224 | Hbut_0109 | Decarboxylase. | Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase. | 0.800 |
Hbut_0304 | argF | Hbut_0304 | Hbut_1203 | Argininosuccinate lyase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.860 |
Hbut_0304 | argG | Hbut_0304 | Hbut_0305 | Argininosuccinate lyase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.999 |
Hbut_0304 | carA | Hbut_0304 | Hbut_0303 | Argininosuccinate lyase. | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | 0.958 |
Hbut_0304 | carB | Hbut_0304 | Hbut_0302 | Argininosuccinate lyase. | Carbamoyl-phosphate synthase large chain. | 0.961 |
Hbut_0399 | Hbut_0224 | Hbut_0399 | Hbut_0224 | L asparaginase. | Decarboxylase. | 0.847 |
Hbut_0399 | Hbut_1044 | Hbut_0399 | Hbut_1044 | L asparaginase. | Aspartate aminotransferase. | 0.917 |
Hbut_0399 | Hbut_1547 | Hbut_0399 | Hbut_1547 | L asparaginase. | Hypothetical protein. | 0.810 |
Hbut_0399 | argG | Hbut_0399 | Hbut_0305 | L asparaginase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.900 |
Hbut_0399 | pyrB | Hbut_0399 | Hbut_0110 | L asparaginase. | Aspartate carbamoyltransferase. | 0.902 |
Hbut_0399 | pyrI | Hbut_0399 | Hbut_0109 | L asparaginase. | Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase. | 0.900 |
Hbut_1044 | Hbut_0224 | Hbut_1044 | Hbut_0224 | Aspartate aminotransferase. | Decarboxylase. | 0.948 |
Hbut_1044 | Hbut_0399 | Hbut_1044 | Hbut_0399 | Aspartate aminotransferase. | L asparaginase. | 0.917 |
Hbut_1044 | Hbut_1547 | Hbut_1044 | Hbut_1547 | Aspartate aminotransferase. | Hypothetical protein. | 0.943 |
Hbut_1044 | argG | Hbut_1044 | Hbut_0305 | Aspartate aminotransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.945 |
Hbut_1044 | pyrB | Hbut_1044 | Hbut_0110 | Aspartate aminotransferase. | Aspartate carbamoyltransferase. | 0.912 |
page 1 of 4