Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Hbut_0896 | Hbut_1550 | DNA polymerase III. | Conserved archaeal protein. | 0.408 |
Hbut_0896 | Hbut_1638 | DNA polymerase III. | DNA repair and recombination protein radB. | 0.622 |
Hbut_1180 | Hbut_1550 | Conserved archaeal protein. | Conserved archaeal protein. | 0.490 |
Hbut_1180 | Hbut_1638 | Conserved archaeal protein. | DNA repair and recombination protein radB. | 0.413 |
Hbut_1263 | Hbut_1550 | Conserved archaeal protein. | Conserved archaeal protein. | 0.444 |
Hbut_1263 | Hbut_1638 | Conserved archaeal protein. | DNA repair and recombination protein radB. | 0.418 |
Hbut_1548 | Hbut_1550 | Universally conserved protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Conserved archaeal protein. | 0.814 |
Hbut_1548 | Hbut_1638 | Universally conserved protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | DNA repair and recombination protein radB. | 0.412 |
Hbut_1550 | Hbut_0896 | Conserved archaeal protein. | DNA polymerase III. | 0.408 |
Hbut_1550 | Hbut_1180 | Conserved archaeal protein. | Conserved archaeal protein. | 0.490 |
Hbut_1550 | Hbut_1263 | Conserved archaeal protein. | Conserved archaeal protein. | 0.444 |
Hbut_1550 | Hbut_1548 | Conserved archaeal protein. | Universally conserved protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | 0.814 |
Hbut_1550 | Hbut_1551 | Conserved archaeal protein. | Hypothetical protein. | 0.488 |
Hbut_1550 | Hbut_1638 | Conserved archaeal protein. | DNA repair and recombination protein radB. | 0.431 |
Hbut_1551 | Hbut_1550 | Hypothetical protein. | Conserved archaeal protein. | 0.488 |
Hbut_1638 | Hbut_0896 | DNA repair and recombination protein radB. | DNA polymerase III. | 0.622 |
Hbut_1638 | Hbut_1180 | DNA repair and recombination protein radB. | Conserved archaeal protein. | 0.413 |
Hbut_1638 | Hbut_1263 | DNA repair and recombination protein radB. | Conserved archaeal protein. | 0.418 |
Hbut_1638 | Hbut_1548 | DNA repair and recombination protein radB. | Universally conserved protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | 0.412 |
Hbut_1638 | Hbut_1550 | DNA repair and recombination protein radB. | Conserved archaeal protein. | 0.431 |