Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APL_0706 | nagA | APL_0706 | APL_1756 | Putative HTH-type transcriptional regulator. | N-acetylglucosamine-6-phosphate deacetylase. | 0.418 |
APL_0706 | nanA | APL_0706 | APL_1754 | Putative HTH-type transcriptional regulator. | N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. | 0.629 |
APL_0706 | nanE | APL_0706 | APL_1752 | Putative HTH-type transcriptional regulator. | Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). | 0.699 |
APL_1751 | nagA | APL_1751 | APL_1756 | Hypothetical protein. | N-acetylglucosamine-6-phosphate deacetylase. | 0.409 |
APL_1751 | nagB | APL_1751 | APL_1755 | Hypothetical protein. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.476 |
APL_1751 | nanA | APL_1751 | APL_1754 | Hypothetical protein. | N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. | 0.604 |
APL_1751 | nanE | APL_1751 | APL_1752 | Hypothetical protein. | Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). | 0.670 |
APL_1751 | nanK | APL_1751 | APL_1753 | Hypothetical protein. | Putative N-acetylmannosamine kinase. | 0.641 |
dapB | nanA | APL_0684 | APL_1754 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. | 0.746 |
fucP | nanA | APL_1688 | APL_1754 | L-fucose permease. | N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. | 0.566 |
nagA | APL_0706 | APL_1756 | APL_0706 | N-acetylglucosamine-6-phosphate deacetylase. | Putative HTH-type transcriptional regulator. | 0.418 |
nagA | APL_1751 | APL_1756 | APL_1751 | N-acetylglucosamine-6-phosphate deacetylase. | Hypothetical protein. | 0.409 |
nagA | nagB | APL_1756 | APL_1755 | N-acetylglucosamine-6-phosphate deacetylase. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.999 |
nagA | nanA | APL_1756 | APL_1754 | N-acetylglucosamine-6-phosphate deacetylase. | N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. | 0.630 |
nagA | nanE | APL_1756 | APL_1752 | N-acetylglucosamine-6-phosphate deacetylase. | Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). | 0.987 |
nagA | nanK | APL_1756 | APL_1753 | N-acetylglucosamine-6-phosphate deacetylase. | Putative N-acetylmannosamine kinase. | 0.850 |
nagB | APL_1751 | APL_1755 | APL_1751 | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | Hypothetical protein. | 0.476 |
nagB | nagA | APL_1755 | APL_1756 | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | N-acetylglucosamine-6-phosphate deacetylase. | 0.999 |
nagB | nanA | APL_1755 | APL_1754 | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. | 0.694 |
nagB | nanE | APL_1755 | APL_1752 | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). | 0.887 |
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