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serS protein (Halorubrum lacusprofundi) - STRING interaction network
"serS" - Serine--tRNA ligase in Halorubrum lacusprofundi
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
serSSerine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (456 aa)    
Predicted Functional Partners:
Hlac_0317
PFAM- CoA-binding domain protein; KEGG- hma-rrnAC0888 succinyl-CoA synthetase (704 aa)
       
      0.996
thrS
Threonine--tRNA ligase; TIGRFAM- threonyl-tRNA synthetase; PFAM- tRNA synthetase class II (G H P and S); TGS domain protein; Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG- nph-NP2410A threonine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family (649 aa)
 
 
  0.978
trpS
Tryptophan--tRNA ligase; PFAM- aminoacyl-tRNA synthetase class Ib; KEGG- nph-NP0442A tryptophanyl-tRNA synthetase (534 aa)
   
 
  0.962
Hlac_0293
TIGRFAM- glycyl-tRNA synthetase; PFAM- tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG- hwa-HQ3709A glycyl-tRNA synthetase (594 aa)
     
   
  0.956
ksgA
Probable ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (303 aa)
 
   
  0.955
argS
Arginine--tRNA ligase; TIGRFAM- arginyl-tRNA synthetase; KEGG- nph-NP0066A arginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (602 aa)
 
   
  0.954
Hlac_0366
TIGRFAM- leucyl-tRNA synthetase; KEGG- nph-NP0452A leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (906 aa)
 
   
  0.952
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (714 aa)
 
   
  0.948
Hlac_2671
TIGRFAM- phenylalanyl-tRNA synthetase, alpha subunit; PFAM- phenylalanyl-tRNA synthetase class IIc; KEGG- nph-NP0696A phenylalanyl-tRNA synthetase subunit alpha (502 aa)
 
   
  0.942
valS
Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a "posttransfer" editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 2 subfamily (892 aa)
 
   
  0.928
Your Current Organism:
Halorubrum lacusprofundi
NCBI taxonomy Id: 416348
Other names: H. lacusprofundi ATCC 49239, Halorubrum lacusprofundi, Halorubrum lacusprofundi ACAM 34, Halorubrum lacusprofundi ATCC 49239, Halorubrum lacusprofundi ATCC49239, Halorubrum lacusprofundi str. ATCC 49239, Halorubrum lacusprofundi strain ATCC 49239
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