STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0737PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chy:CHY_0448 ABC transporter, ATP-binding protein. (270 aa)    
Predicted Functional Partners:
Tlet_0735
PFAM: regulatory protein GntR HTH; KEGG: chy:CHY_0446 transcriptional regulator, GntR family.
 
  
 0.911
Tlet_0734
KEGG: chy:CHY_0445 hypothetical protein.
       0.800
Tlet_0736
KEGG: chy:CHY_0447 hypothetical protein.
       0.800
Tlet_1561
KEGG: tma:TM0764 putative ABC-2 type transport system permease protein.
  
 
 0.718
Tlet_1415
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1663 putative cobalt transport system ATP-binding protein.
  
    0.611
Tlet_1320
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0705 ABC transporter, ATP-binding protein.
 
  
 0.569
Tlet_1995
PFAM: GCN5-related N-acetyltransferase; KEGG: tma:TM1178 acetyltransferase-related protein.
  
   
 0.515
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.487
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
   0.461
Tlet_1212
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC1558 ABC-type transport system,membrane ATPase component.
 
  0.450
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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