STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1805PFAM: extracellular solute-binding protein family 1; KEGG: sma:SAV2143 ABC transporter solute-binding protein. (417 aa)    
Predicted Functional Partners:
Tlet_1804
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi03541 putative transporter; RBL01129.
  
  0.979
Tlet_1803
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2740 binding-protein-dependent transport systems inner membrane component.
  
   0.806
Tlet_2033
PFAM: extracellular solute-binding protein family 1; KEGG: tde:TDE1283 extracellular solute-binding lipoprotein, putative.
  
     0.773
Tlet_1802
PFAM: PfkB domain protein; KEGG: tpe:Tpen_0752 PfkB domain protein.
 
    0.767
Tlet_1801
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein; KEGG: bld:BLi03868 hypothetical protein.
 
     0.762
Tlet_1799
PFAM: ADP-ribosylation/Crystallin J1; KEGG: pfo:Pfl_4137 ADP-ribosylation/crystallin J1.
 
     0.759
Tlet_1143
PFAM: extracellular solute-binding protein family 1; KEGG: lxx:Lxx23570 ABC transporter, sugar binding protein.
  
     0.758
Tlet_1136
PFAM: extracellular solute-binding protein family 1; KEGG: tma:TM0432 multiple sugar transport system substrate-binding protein.
  
     0.752
Tlet_1798
PFAM: major facilitator superfamily MFS_1; KEGG: sao:SAOUHSC_00042 hypothetical protein.
       0.723
Tlet_1800
Hypothetical protein; KEGG: afu:AF0748 A. fulgidus predicted coding region AF0748.
       0.723
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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