STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_0050Putative transposase helper protein for IS712A; IstB-like ATP-binding protein; Conserved hypothetical protein. (252 aa)    
Predicted Functional Partners:
tnp712
Transposase for insertion sequence element IS712A.
    0.891
tnp712-5
Transposase for insertion sequence element IS712E; Integrase, catalytic region; Specificity unclear.
    0.599
tnp712-2
Transposase for insertion sequence element IS712B; Integrase, catalytic region; Specificity unclear.
    0.578
tnp712-4
Transposase for insertion sequence element IS712D; PF00665: Integrase core domain; Conserved hypothetical protein.
    0.578
tnp712-6
Transposase for insertion sequence element IS712F; PF00665: Integrase core domain; Conserved hypothetical protein.
    0.578
tnp712-7
Pseudogene; UDP-galactopyranose mutase, contains frameshift; High confidence in function and specificity.
    0.578
tnp712-8
Transposase for insertion sequence element IS712H.
    0.578
ps105
Hypothetical protein, phage asociated.
       0.523
dnaC
DnaC protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.514
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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