STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ps460Phage holin, LL-H; High confidence in function and specificity. (153 aa)    
Predicted Functional Partners:
ps342
Major head protein.
      
 0.831
ps461
Phage lysin, cell wall hydrolase; High confidence in function and specificity.
       0.773
llmg_1386
Hypothetical protein.
      
 0.751
ps459
Conserved hypothetical protein.
       0.741
ps458
Conserved hypothetical protein.
       0.726
llmg_1388
Conserved hypothetical protein; ORF20; putative membrane protein.
      
 0.725
ps347
Major tail protein.
      
 0.724
llmg_1389
Hypothetical protein; ORF19.
      
 0.723
ps457
Hypothetical serine/threonine-rich protein P11E10.02c in chromosome I precursor; Phage minor structural protein, N-terminal, probable phage host specificity protein; High confidence in function and specificity.
       0.696
ps455
Putative phage tail component protein; High confidence in function and specificity.
       0.696
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.