STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_000686Amino_oxidase domain-containing protein. (286 aa)    
Predicted Functional Partners:
jhhlp_000687
Amino_oxidase domain-containing protein.
 
     0.938
jhhlp_000448
Tryptophan synthase.
     
 0.837
jhhlp_006212
Uncharacterized protein.
    
 0.761
jhhlp_005622
Uncharacterized protein.
   
 0.739
jhhlp_003698
Uncharacterized protein.
    
 0.736
jhhlp_004284
Histone H3; Belongs to the histone H3 family.
    
 0.736
jhhlp_006564
WD_REPEATS_REGION domain-containing protein.
    
 0.726
jhhlp_005654
Histone domain-containing protein; Belongs to the histone H2B family.
    
  0.719
jhhlp_007326
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.717
jhhlp_005207
Hist_deacetyl domain-containing protein.
    
 0.717
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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