STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO75518.12-haloacid dehalogenase. (235 aa)    
Predicted Functional Partners:
SDP14036.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase.
    
 0.810
SDO78092.1
GMP synthase (glutamine-hydrolyzing).
    
  0.710
SDO20795.1
2-haloacid dehalogenase.
  
  
 
0.684
SDO78313.1
IMP dehydrogenase.
    
 0.672
SDO91291.1
FAD/FMN-containing dehydrogenase.
 
  
  0.663
SDO66643.1
Aquaporin Z.
    
  0.637
SDO75475.1
Hypothetical protein.
       0.625
SDP07175.1
Methanesulfonate monooxygenase reductase component.
  
 
  0.493
SDP11785.1
Zn-dependent protease (includes SpoIVFB).
    
  0.484
SDP08553.1
Methylthioadenosine phosphorylase.
   
 
 0.413
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.