STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP15835.1Phosphate:acyl-[acyl carrier protein] acyltransferase. (347 aa)    
Predicted Functional Partners:
SDP15873.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
 
  
 0.981
SDO65295.1
Acyl-phosphate glycerol-3-phosphate acyltransferase.
 
  
 0.956
SDP62532.1
[Acyl-carrier-protein] S-malonyltransferase.
  
  
 0.932
SDO24436.1
Large subunit ribosomal protein L32.
  
  
 0.901
SDP55707.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
 
  
 0.883
SDP65280.1
Small subunit ribosomal protein S8.
   
    0.846
SDP65439.1
Small subunit ribosomal protein S13.
   
    0.846
SDP65372.1
LSU ribosomal protein L15P.
   
    0.844
SDP65317.1
LSU ribosomal protein L18P.
   
    0.843
SDP65483.1
DNA-directed RNA polymerase subunit alpha.
   
    0.842
Your Current Organism:
Filomicrobium insigne
NCBI taxonomy Id: 418854
Other names: CGMCC 1.6497, F. insigne, Filomicrobium insigne Wu et al. 2009, Hyphomicrobium sp. SLG5B-19, LMG 23927, LMG:23927, strain SLG5B-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.