STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU58742.1NADPH:quinone reductase. (316 aa)    
Predicted Functional Partners:
SDU53016.1
NADPH2:quinone reductase.
  
     0.762
SDU87882.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.672
SDU08862.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.635
SDU14538.1
D-arabinose 1-dehydrogenase, Zn-dependent alcohol dehydrogenase family.
  
     0.577
SDU74179.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.561
SDU63739.1
[acyl-carrier-protein] S-malonyltransferase.
    
 0.559
SDU58753.1
LPXTG-motif cell wall anchor domain-containing protein.
       0.501
SDU39593.1
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.493
SDU51788.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
 0.488
SDU58728.1
Uncharacterized membrane protein.
       0.487
Your Current Organism:
Jiangella alkaliphila
NCBI taxonomy Id: 419479
Other names: DSM 45079, J. alkaliphila, JBRI 2008, JCM 15620, Jiangella alkaliphila Lee 2008, KCTC 19222, strain D8-87
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