STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU64472.1Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (298 aa)    
Predicted Functional Partners:
SDU64483.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.999
SDU73711.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 
 0.995
SDU64449.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 
 0.987
SDU64440.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.978
SDU73706.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.964
SDU75258.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.964
SDU64494.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
 
 
  0.953
SDU78399.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.950
SDU78390.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 
 0.946
SDU75262.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 
 0.939
Your Current Organism:
Jiangella alkaliphila
NCBI taxonomy Id: 419479
Other names: DSM 45079, J. alkaliphila, JBRI 2008, JCM 15620, Jiangella alkaliphila Lee 2008, KCTC 19222, strain D8-87
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