STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY68318.1Predicted peroxiredoxin. (147 aa)    
Predicted Functional Partners:
SCY32123.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
 0.958
SCY77884.1
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
    
 0.569
SCY68304.1
Hypothetical protein.
       0.522
SCX78960.1
tRNA 2-thiouridine synthesizing protein E.
     
 0.471
SCY57452.1
Hypothetical protein.
     
 0.471
SCY79903.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
     
 0.453
SCY07034.1
Heterodisulfide reductase subunit B/heterodisulfide reductase subunit C.
  
  
 0.448
SCY07055.1
Heterodisulfide reductase subunit B.
  
  
 0.448
SCY32334.1
Heterodisulfide reductase subunit B/heterodisulfide reductase subunit C.
  
  
 0.448
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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